CDS

Accession Number TCMCG002C00229
gbkey CDS
Protein Id XP_020104268.1
Location join(1029145..1029162,1029257..1029367,1029507..1029594,1029875..1029965,1030033..1030093,1030179..1030309,1030754..1030871,1030954..1031077,1031178..1031279,1031366..1031434,1031552..1031634)
Gene LOC109721174
GeneID 109721174
Organism Ananas comosus

Protein

Length 331aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA371634
db_source XM_020248679.1
Definition tRNA pseudouridine(38/39) synthase isoform X4 [Ananas comosus]

EGGNOG-MAPPER Annotation

COG_category J
Description tRNA pseudouridine synthase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K01855        [VIEW IN KEGG]
EC 5.4.99.45        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0001522        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006400        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009982        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016556        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0016866        [VIEW IN EMBL-EBI]
GO:0031119        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1990481        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGCCCACTGTTGAGTCTGAGATCTTCAAAGCACTTGAGAGAACTAAGCTTTTGGTTGGCAATAAAGAGGAGTCGCGTTACTCCAGGTGTGGTAGAACCGACAAAGGAGTTTCGTCGACAGGCCAAGTGATTTCATTATATCTGCGATCTAATCTAAAGGACATTGGAGGGAACAGCACTGAACGCAAGAATTCGGCATCAGAAGAAAAATGTGAAATTGATTATGTAAGGGTGCTAAATAGAGTCCTTCCAAAAGATATACGTGTAATTGGCTGGTGTCCTGTTCCTGCAGATTTTCATGCAAGGTTCGGCTGTTTGAGCAGGGAATACAGATATTTTTTCTGGAAAAGGAATTTAGATATACTGAAAATGCAGGAAGCTGCTGCAAAGTTCATCGGAGAGCATGACTTCAGAAATTTTTGTAAGATGGATGCAGCAAATGTGAGTAACTACAGGCGAAAAATCACAAATTTTAATATTTCCTCCTGCAATGAAAGGTCGAATGATGATGAACTGTGGGCAGTGACAATTAAGGGAAGTGCTTTTCTCTGGCATCAAGTACGCTGCATGATTGCAGTATTATTTATGGTAGGCCAGGGCCTTGAAACCCCTAGTATAGTTGATGCACTACTAGACACTAGCAAAACTCCGAGAAAACCTCAATACAACATGGCACCCGAGCTCCCACTGGTTCTGCGGTCCTGTGAATTTGAAAATATCAGCTTTACTTGTTCATTAGAAGCAAGTAAAGCGGTAACTGAACACCTGAGGAGTGAATATCACAACTATATGCTCCAAGCAGCTATACATAATGAAGCCTTGGGTTGCCTATGCTCTCCAGATAATAGTTCACCAGAACCTGATCGAAAGAACAGAGGTCATATACCTCTCTTGCTACGACAGACTGAGCCATCATACGAAGAACGGCTAGCCAAATTCAACGCAAAAGGGATTCGTCGTAGATCTTCTGTATCGTCTTCGGGCAATGTATAG
Protein:  
MEPTVESEIFKALERTKLLVGNKEESRYSRCGRTDKGVSSTGQVISLYLRSNLKDIGGNSTERKNSASEEKCEIDYVRVLNRVLPKDIRVIGWCPVPADFHARFGCLSREYRYFFWKRNLDILKMQEAAAKFIGEHDFRNFCKMDAANVSNYRRKITNFNISSCNERSNDDELWAVTIKGSAFLWHQVRCMIAVLFMVGQGLETPSIVDALLDTSKTPRKPQYNMAPELPLVLRSCEFENISFTCSLEASKAVTEHLRSEYHNYMLQAAIHNEALGCLCSPDNSSPEPDRKNRGHIPLLLRQTEPSYEERLAKFNAKGIRRRSSVSSSGNV